A tool for multiple sequence alignment.
نویسندگان
چکیده
منابع مشابه
A tool for multiple sequence alignment.
Multiple sequence alignment can be a useful technique for studying molecular evolution and analyzing sequence-structure relationships. Until recently, it has been impractical to apply dynamic programming, the most widely accepted method for producing pairwise alignments, to comparisons of more than three sequences. We describe the design and application of a tool for multiple alignment of amino...
متن کاملMuSiC: a tool for multiple sequence alignment with constraints
SUMMARY MuSiC is a web server to perform the constrained alignment of a set of sequences, such that the user-specified residues/nucleotides are aligned with each other. The input of the MuSiC system consists of a set of protein/DNA/RNA sequences and a set of user-specified constraints, each with a fragment of residue/nucleotide that (approximately) appears in all input sequences. The output of ...
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An algorithm for progressive multiple alignment of sequences with insertions " , 1. Introduction The problem of sequence alignment is to find the patterns of sequence conservation and similarity between pairs or sets of given sequences. In biological contexts, similarity between biological sequences usually amounts to either functional or structural similarities or divergence from a common ance...
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Genetic algorithms are relatively new optimization technique that can be applied to various problems, including those that are NP-hard. We have proposed a new web based tool MSA-GA (Multiple Sequence Alignment tool based on Genetic Approach) is developed for aligning the DNA sequences in order to find out the alignment of sequence. With this tool we have developed two different Genetic crossove...
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ژورنال
عنوان ژورنال: Proceedings of the National Academy of Sciences
سال: 1989
ISSN: 0027-8424,1091-6490
DOI: 10.1073/pnas.86.12.4412